Pipeline

Warning

Deprecated code. A new set of scripts to automatically derive pipeline reference files is being developed and will be integrated soon.

Create STIS Superdarks and Superbiases for the CCD detector.

refstis.pipeline.clean_directory(root_path)

Cleans directory of any fits files that do not end in _raw.fits

Warning

This WILL remove ANY files that do not match *_raw.fits. This includes any plots, txt files, other fits files, anything.

refstis.pipeline.collect_new(observations_to_get, settings)

Function to find and retrieve new datasets for given proposal.

refstis.pipeline.grab_between(file_list, mjd_start, mjd_end)

Select files between given start/end times

Parameters

• file_list (list) – files on which to filter

• mjd_start (float) – earliest time

• mjd_end (float) – latest time

Yields

filenames with mjd_start < TEXPSTRT < mjd_end

refstis.pipeline.make_pipeline_reffiles(root_folder, last_basedark=None, last_basebias=None)

Make reference files like the refstis pipeline

1. Separate dark and bias datasets into week folders 2.

refstis.pipeline.pull_info(foldername)

Pull proposal and week number from folder name

A valid proposal is a string of 5 numbers from 0-9 A valid week is a string of ‘wk’ + 2 numbers ranging from 0-9. A valid biweek is the string ‘biwk’ + 2 numbers from 0-9.

Parameters

foldername – string, name of folder to search in

Returns

• proposal – string, proposal number as string

• week – string, week of the anneal (wk01, etc)

refstis.pipeline.pull_out_subfolders(root_folder)

Walk through input folder and use regular expressions to return lists of the folders for each gain and for each week

Parameters

root_folder – string, the folder to walk through

Returns

• gain_folders – list, containing folders for each gain

• week_folders – list, containing folders for each week

refstis.pipeline.run(config_file='config.yaml')

Run the reference file pipeline

refstis.pipeline.separate_period(base_dir)

Separate observations in the base dir into needed folders.

Parameters

str (base_dir,) – directory containing darks and biases to be split.

refstis.pipeline.split_files(all_files)

Split file list into two smaller lists for iraf tasks

Each list will have a selection from both early and late in time.

Parameters

all_files (list) – full list of files

Returns

super_list – list of lists containing the split list of all files

Return type

list